rs51328161 SNP Detail

Summary

• ID
  rs51328161
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:61564118 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTGGAGCCCC GAAGTACAGT GTGGATGCAA ACAGGAGGAC
  TAATGTCTCC TCAAAGGCTT CTAGCCTATC AAACACCGAC TTACTTACTT ATACCTGTAA
  M
  ATTTTCAGTT TGGCTTTTTT TTAAAAGTAT CTTAAAATGT GTATTTGCTT GAATGTATGG
  ACTTATACAC ACATGACTTG TACCCACAGA GGCTACAAG                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss62418768	NES17249502	PERLEGEN	MM_PANEL2	f	SNP	C		A	A	A	A	C	C	A	A	A	A	A	A	A
ss139613009	ENSMUSSNP6412988	ENSEMBL	ENSEMBL_Sanger	f	SNP		C						C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs51328161					SNP	C	C	A	A	A	A	C	C	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss62418768	NES17249502	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:61564118 () rs orientation: forward

Symbol	Name	Function Class
Gm5461	predicted gene 5461	859 bp upstream
Gm62465	predicted gene, 62465	561 bp upstream
Rr289706	regulatory region 289706	283 bp proximal
Rr297339	regulatory region 297339	882 bp proximal
Tssr129059	transcription start site region 129059	775 bp upstream