rs51328906 SNP Detail

Summary

• ID
  rs51328906
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:113305321 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCTAG TGTCCACATC ATTTCACAAC
  Y
  GCCTATAACT CCAGTTCCAG GGGAT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss145681385	ENSMUSSNP397768	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	C
ss322423814	CHEV_7_120849598	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs51328906					SNP	T	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:113305321 () rs orientation: forward

Symbol	Name	Function Class
Gm5600	predicted gene 5600	10 bp downstream
Gm71809	predicted gene, 71809	within coordinates
Rr152955	regulatory region 152955	within coordinates
Rr163207	regulatory region 163207	1566 bp proximal
Rr168678	regulatory region 168678	1921 bp distal