rs51330420 SNP Detail

Summary

• ID
  rs51330420
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:79405324 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCCTA TCTCCTTATC ATATACATGA
  C
  ATATGTATAT ACATATATGC ATCTC                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss146049383	ENSMUSSNP2356313	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
ss325475896	CHEV_17_79497235	CHEVERUD	SCREENING_POP	f	SNP			C	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs51330420					SNP	C	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:79405324 () rs orientation: forward

Symbol	Name	Function Class
Gm65520	predicted gene, 65520	within coordinates
Rr392979	regulatory region 392979	1532 bp upstream
Rr531250	regulatory region 531250	1956 bp distal