rs51333501 SNP Detail

Summary

• ID
  rs51333501
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:126838189 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGCATAAGTT ACCAAGAGGA TTTGTAGCTG TGTGGATCTT
  GATCTGATCT AATCTAGGTA TTTCCAAATG TTACGGAAGT ATGCGTGAGA GCATAAGAAA
  S
  TCTATCTGGG GCTAGTGGAT GGCTCACTGG GCAAGAGCAC TGACTGCTCT TCTGAAGGTC
  CTGAGTTCAA ATTCCAGCAA TCACATGGTG GCTCACAAC                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss147516189	ENSMUSSNP2301316	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs51333501					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:126838189 () rs orientation: forward

Symbol	Name	Function Class
Rr564430	regulatory region 564430	1503 bp distal
Rr564431	regulatory region 564431	400 bp proximal