rs51339787 SNP Detail

Summary

• ID
  rs51339787
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:141147193 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCCCA CCACACCCAA CTATGGACCA
  G
  ATCGGCTCTG AAACTCCTCT CGTCT                                      
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss147735868	ENSMUSSNP1186119	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	A/J
rs51339787					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:141147193 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15226	CpG island 15226	204 bp distal
Cpgi15227	CpG island 15227	1752 bp proximal
Gm70182	predicted gene, 70182	1642 bp downstream
Gm70184	predicted gene, 70184	within coordinates
Hspb7	heat shock protein family, member 7 (cardiovascular)	897 bp upstream
Rr100445	regulatory region 100445	607 bp proximal
Rr103390	regulatory region 103390	1793 bp distal
Tssr40052	transcription start site region 40052	345 bp upstream
Tssr40053	transcription start site region 40053	875 bp upstream
Tssr40054	transcription start site region 40054	1777 bp upstream
Tssr40055	transcription start site region 40055	1805 bp upstream
Tssr40056	transcription start site region 40056	1812 bp upstream
Tssr40057	transcription start site region 40057	1868 bp upstream
Tssr40058	transcription start site region 40058	1903 bp upstream
Tssr40059	transcription start site region 40059	1926 bp upstream
Tssr40060	transcription start site region 40060	1959 bp upstream