rs51344384 SNP Detail

Summary

• ID
  rs51344384
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:185868036 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTAGTGGCCT CTGGTGAGCG GATTCTGTAA GCAATGGCTG
  TGCTCCAGTT GAACACTTTC AAGAGATGAT AATTGGTAAA GACCATTTAA TCACACCTTG
  M
  CTTTCTATCA GCTACAGCTG TGGATGAGTA GGAGACACCC TGCTGAGGAC ACCACCTTTG
  ATTGCTTAAA AAAAAAAAAA AAAAGCTTAA AGCTTTTGA                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss146452376	ENSMUSSNP1338156	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A
ss320182224	CHEV_1_187959718	CHEVERUD	SCREENING_POP	f	SNP			A	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs51344384					SNP	C	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:185868036 () rs orientation: forward

Symbol	Name	Function Class
Rr425453	regulatory region 425453	914 bp proximal