rs51344895 SNP Detail

Summary

• ID
  rs51344895
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:134069648 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTAGG AATTTGCTGG GCTTCTGGGG
  G
  ACACAGTCTC CTGCAGTGTG TCTGT                                      
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	LG/J	SM/J
ss147525905	ENSMUSSNP7089478	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
ss321346947	CHEV_4_133898252	CHEVERUD	SCREENING_POP	f	SNP		G	G
SNP Consensus Information
SNP					Consensus Type	DBA/2J	LG/J	SM/J
rs51344895					SNP	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:134069648 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15035	CpG island 15035	585 bp proximal
Rr601645	regulatory region 601645	354 bp proximal
Slc30a2	solute carrier family 30 (zinc transporter), member 2	844 bp upstream
Tssr39548	transcription start site region 39548	806 bp upstream
Tssr39549	transcription start site region 39549	861 bp upstream
Tssr39550	transcription start site region 39550	1156 bp upstream
Tssr39551	transcription start site region 39551	1186 bp upstream
Tssr39552	transcription start site region 39552	1261 bp upstream
Tssr39553	transcription start site region 39553	1295 bp upstream
Tssr39554	transcription start site region 39554	1346 bp upstream
Tssr39555	transcription start site region 39555	1545 bp upstream
Tssr39556	transcription start site region 39556	1665 bp upstream