rs51346651 SNP Detail

Summary

• ID
  rs51346651
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:48161826 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACAACAGATT TCAAAGCTAT
  TTCTTCTTTC ACTACACTGT ACTAATGAAT AACTATAAAA TACATATTTG TTTTAAATCA
  GACAACTTGA GTGTTCCTTT GCTTACTTGT TAAGGTGTAT ATAGAAGGCT CTTTCCGTAA
  CTCTCCACCT TACAGACTGA GGCTCCCTAG GACTCCCCGT TCTCCCAGTG CTGCAACAGA
  Y
  GGGCCATCAC TGTCGCCCAG TGTTTACATG GAAGCAACAC GTATTCAACT CACTGAGCCA
  ACTCCTCCCA TGGGGATCTT TAAATTCTTA TTAAGAGCAT GCTGTATAAA TGAACACCGT
  AACTTTAGGA GTCACGCAGC TATAGCCCCA GCACTGAGGA AGCAGAGAGG AATACTACTT
  TCCAAGTTCA AGACCAGCCA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss60606899	NES16304518	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T	C	T	T	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs51346651					SNP	T	T	T	T	T	T	C	T	T	T	C	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60606899	NES16304518	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:48161826 () rs orientation: forward

Symbol	Name	Function Class
Cdkn2aip	CDKN2A interacting protein	553 bp downstream
Gm64835	predicted gene, 64835	1864 bp upstream
Tssr81246	transcription start site region 81246	1829 bp downstream