rs51350685 SNP Detail

Summary

• ID
  rs51350685
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:85940221 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AAGACCCTGT CTTCAAATGC AGTCCTGTTC CGAGGTCTGG
  TATATTAGGA CTTCAAATAT TCAGATTTGT GAGACACAGT CGGGACCACA ATAGCCTTTA
  Y
  CAGTTAATGA GGGGCCATGG TTGTGAGGAG CCTCTGAGTA GGTGGTGGTC ATGGTAACCC
  CAAGTTCTCC TAGGGGTAGT GTCTGTCCAA GTCTGTCTT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss148282827	ENSMUSSNP6612134	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51350685					SNP	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:85940221 () rs orientation: forward

Symbol	Name	Function Class
Cpgi7499	CpG island 7499	1931 bp proximal
Gm41375	predicted gene, 41375	within coordinates
Gramd4	GRAM domain containing 4	1675 bp upstream
Rr507408	regulatory region 507408	1296 bp distal
Rr507409	regulatory region 507409	1946 bp distal
Rr507410	regulatory region 507410	346 bp proximal
Rr507411	regulatory region 507411	1223 bp proximal