rs51352386 SNP Detail

Summary

• ID
  rs51352386
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:21375424 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAACTGCCTC AGATGAGCTG
  CCTAGCCTCA CTGGGCCCTG TGTACTTATC TATCAACTGT CAGGATCGAA GTACTTTGTC
  TTTAGAGAAT TATACAGCCA TAAAATCCTG TAGCCTTTAA TGCCTGCAAG CTTGAAAAGG
  GACAGATGAA GACCCCTTCC TTCTTTGTTT CTACATGAAT TCCCCCCGCC CCCCCCCCAC
  R
  TGTGTTTATG ATTCCTTTAT AGATCCTATC TTAAACTGCA GCAACTTTCC TACTTTCAGG
  ACAATCTCAT CTCCTCCTGA TTCTGGCAGG ATCCTATTAG TAAGCTCTCA GATCAGCTTT
  GAATCTTTGC CACAGCATTT TCTCAGAAGA AGAGGGCTCA GCAGATGCCA CTTAGAGCCA
  ATGAACCATG GCCTTTAGAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	MSM/Ms
ss146347189	ENSMUSSNP6364234	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	MSM/Ms
rs51352386					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:21375424 () rs orientation: forward

Symbol	Name	Function Class
Cpgi11264	CpG island 11264	1382 bp distal
Gm13327	predicted gene 13327	1502 bp upstream
Gpr158	G protein-coupled receptor 158	Intron
Rr552705	regulatory region 552705	1412 bp distal