rs51356049 SNP Detail

Summary

• ID
  rs51356049
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:35386979 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACTTTCAGA GCAGGATTCC
  AGCTGTGGTG AGCTGTGGCC ATTCAGTCAC CTGTGCTGAA TAGCAAAGAC GGTCCCCTCC
  CATGAGTTAC TCGGGAATAA TAAAGGCCCA GACTGAAAAG ATACAGAGGA GCTAATATCT
  GATCAGCGCA CAGATGTACA CGGAACTGTG AATAGTAACT ACAGCTTCCA TTTAGGGGAG
  K
  AAAAAAAGTC TCCTGACAAA TGAGAGTTTG AGTGTATCGC CTCACTTCAT TACCTTTGTG
  CATTTTGGGG GGCCAGAAAT GTTAATTTTA ATCCATGGAA GACCCGCTAG ACGGAAGGTT
  GGGGACTTGG GTCCAAGCCT GGGTCCCTGC TTGGGCCTCT CCTGGGAATA CTGAGCAGTT
  TCCTTACTGC CGCCTGAGGG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss60386840	NES15880914	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	T	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs51356049					SNP	G	G	G	G	G	G	T	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60386840	NES15880914	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:35386979 () rs orientation: forward

Symbol	Name	Function Class
Rr67159	regulatory region 67159	1822 bp proximal