rs51357974 SNP Detail

Summary

• ID
  rs51357974
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:99868425 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G AATTACAGGT ATCTGGAGAA AGAGTCCCAG CCTATGTTTA
  AAAAAACACC AAATAGGAGA AGCACAGTCC TTATTCATTC CCAAAAAAAA AAAAAAAAAA
  T
  TTAAAGTTGC CACTCTGTTG GCCAGCTGCC TTCAGAGGCA GCCGTATGTA GTTAGAGGTT
  TCCTAACATG AAAGTCATTG ACTCCTGGCC CTGTTGCATT T                    
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	MSM/Ms
ss148920102	ENSMUSSNP5986892	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	MSM/Ms
rs51357974					SNP	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:99868425 () rs orientation: forward

Symbol	Name	Function Class
A930011G23Rik	RIKEN cDNA A930011G23 gene	within coordinates
Gm73153	predicted gene, 73153	within coordinates
Rr119570	regulatory region 119570	1825 bp distal
Rr119571	regulatory region 119571	376 bp proximal
Tssr52054	transcription start site region 52054	1416 bp downstream