rs51362812 SNP Detail

Summary

• ID
  rs51362812
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:148783358 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCATT TTGCTCTTAA ATTATCTGAT
  K
  GCAAATCAAA CATATGTGTC AGTTA                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	LG/J	SM/J
ss136066684	ENSMUSSNP6592769	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
ss321017238	CHEV_3_148740686	CHEVERUD	SCREENING_POP	f	SNP		G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	LG/J	SM/J
rs51362812					SNP	T	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:148783358 () rs orientation: forward

Symbol	Name	Function Class
Rr587252	regulatory region 587252	1495 bp distal
Rr587253	regulatory region 587253	189 bp distal
Rr587254	regulatory region 587254	1233 bp proximal
Tssr36091	transcription start site region 36091	622 bp upstream
Tssr36092	transcription start site region 36092	594 bp upstream
Tssr36093	transcription start site region 36093	562 bp upstream
Tssr36094	transcription start site region 36094	529 bp upstream
Tssr36095	transcription start site region 36095	456 bp upstream
Tssr36096	transcription start site region 36096	359 bp upstream