rs51365727 SNP Detail

Summary

• ID
  rs51365727
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:92041981 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAAAAGCGCA GAACCCACTC
  TCCTAAGACA CAGGCCTTAC TCACCTCATT GAAGTGCTGG CTGGTTTTCA TGATGTAAGG
  CGTCCTTTCG TTCTTGTCAA GCTTCATCCA GCCCTGCCCA AGAAACTCTC TGAAAGTTCA
  GAACAAAACA CAAAACCAGT GAGGTTTGTA AGAAATGTTG GCGGACCTTG AGTAGTTGTG
  Y
  TGATTAGACA GGCACATTTA AGTTAAAGTT CATCGACTAT TATCCCCCCC ACTCCGCCCC
  CGCCCCAACA ATTGTCACTG GCCATCTCCA AATAATTTGT ACAAGTCTAG CAGTCCACCA
  CTTAATACTA AAATGAAAAA GATTTTTTTC AGACTCCAGT GTTTGGAACA TTGTCTCAAT
  TACGGGCTTC TCTGAAGTTA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss61925365	NES17107718	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs51365727					SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61925365	NES17107718	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:92041981 () rs orientation: forward

Symbol	Name	Function Class
Rasgrf2	RAS protein-specific guanine nucleotide-releasing factor 2	within coordinates
Rr274007	regulatory region 274007	181 bp distal
Rr280536	regulatory region 280536	438 bp distal