rs51366648 SNP Detail

Summary

• ID
  rs51366648
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:97229895 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGATATGGT ATGAGTTTTA
  TATTAGGAAT ATAGACAGAA AAAAAACATT TTATATCATC TTATCCTAGA CACAGAGTAC
  CCAATGTCAT TATATCCAGG TAATAAAAAC AAGTTCTCTC TTGAGCTCTC ATGTTTATTC
  AAGTTAGGAA ATCAGTATCA ATTTGCACAG CGTTTTCCTA TTCGTGAATT AAATTTATTC
  R
  AGGGTTTTTT CCAAAGGAGC CAAACCTTAT CATCAATTTC ATTACATTAT TACCTCAACT
  ATTATCATGA TTTTTTAAAA AGTCACATCA CAGGAATTTC TAAAATATTT TTGTCGTATT
  TGTGGGGCTC CCTGTGCTAT TTCAACACAT ATAAATTAGA ATGATTAGTC CTGGGCATGT
  GGGTTATTGG TAGAGAACTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	FVB/NJ	KK/HlJ	LG/J	NZW/LacJ	SM/J	WSB/EiJ
ss63608903	NES17040828	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A		A		G
ss325076641	CHEV_15_97162445	CHEVERUD	SCREENING_POP	f	SNP									A		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	FVB/NJ	KK/HlJ	LG/J	NZW/LacJ	SM/J	WSB/EiJ
rs51366648					SNP	A	A	A	A	A	A	A	A	A	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss63608903	NES17040828	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:97229895 () rs orientation: forward

Symbol	Name	Function Class
Pced1b	PC-esterase domain containing 1B	within coordinates
Rr391161	regulatory region 391161	36 bp upstream