rs51367324 SNP Detail

Summary

• ID
  rs51367324
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:21426052 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGCA GGTGATTAGG ATTTGCCTCA
  K
  GCACTAGCAG GGGTGTGATC TTTGC                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	MSM/Ms	SM/J
ss137298262	ENSMUSSNP1482408	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		G
ss323931447	CHEV_12_21381912	CHEVERUD	SCREENING_POP	f	SNP			T		T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	MSM/Ms	SM/J
rs51367324					SNP	T	T	T	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:21426052 () rs orientation: forward

Symbol	Name	Function Class
Cpgi4477	CpG island 4477	1844 bp distal
Gm49586	predicted gene, 49586	1705 bp downstream
Rr463715	regulatory region 463715	1327 bp distal
Rr463717	regulatory region 463717	1819 bp distal
Tssr112933	transcription start site region 112933	1794 bp downstream