rs51371054 SNP Detail

Summary

• ID
  rs51371054
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:18758838 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCAATATTAG AGATTCCTAT TGAAGATAGC TAAAATTCTT
  AATTACCTAG CAAAGTAAAT TTAGAGCTCA GCCTCCACTT CCAGAGAATC TCTGGCCTTT
  Y
  TGCTAATTCT CAAAGCCAGC TCCCCCACAC CAGGAGCTCA AAGCCTGAGC TTGGTAGTTG
  CTAATTTGCA ACTGAATGGA GTACCTGGAC TTCTTCAAA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss145231514	ENSMUSSNP6262360	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
ss325312931	CHEV_17_18675540	CHEVERUD	SCREENING_POP	f	SNP			T	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs51371054					SNP	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:18758838 () rs orientation: forward

Symbol	Name	Function Class
Rr392375	regulatory region 392375	within coordinates