rs51371666 SNP Detail

Summary

• ID
  rs51371666
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:55145613 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGCAA ACCTTTGCTT TGCTGGAGAC
  A
  CAATCGATGC TGGTTAAGAA GTTAG                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	LG/J	SM/J
ss133207709	ENSMUSSNP6003776	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
ss321805428	CHEV_6_55118622	CHEVERUD	SCREENING_POP	f	SNP		A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	LG/J	SM/J
rs51371666					SNP	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:55145613 () rs orientation: forward

Symbol	Name	Function Class
Gm34358	predicted gene, 34358	1434 bp downstream
Inmt	indolethylamine N-methyltransferase	1999 bp downstream
Rr136023	regulatory region 136023	1013 bp distal
Rr136024	regulatory region 136024	988 bp proximal
Rr144444	regulatory region 144444	1694 bp proximal
Rr149929	regulatory region 149929	921 bp distal