rs51372195 SNP Detail

Summary

• ID
  rs51372195
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:25672061 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AACAG GGTCAGTGAT TTAAGTAGAT
  K
  CTGGGAAACT GGAGGTCTTT CAGTT                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss145389325	ENSMUSSNP4220284	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
ss325337976	CHEV_17_25590032	CHEVERUD	SCREENING_POP	f	SNP			T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs51372195					SNP	T	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:25672061 () rs orientation: forward

Symbol	Name	Function Class
Gm63608	predicted gene, 63608	within coordinates
Rr523576	regulatory region 523576	1051 bp distal
Tekt4	tektin 4	1454 bp upstream
Tssr143159	transcription start site region 143159	632 bp upstream
Tssr143160	transcription start site region 143160	1440 bp upstream