rs51372996 SNP Detail

Summary

• ID
  rs51372996
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:93788835 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGGTGGGTG ACAGTGAGGT
  GAAGGACACT GTTGCTTTTG TGGTCAATTC TGAGCAATGG CATCTCCCTG GCCTTGTGTA
  TTCCCAGGGA TGGTTTCTCT GAATGACTAC CATGTCCATT GTCCTGTAGG GAAACAGAAT
  CTCCAAGGAG ACAGGACCAG GGTGGGTAAT TGGAGCAGAG AGGGAGCTCT GGGAGAAGAG
  R
  CCATTCTCCA GGACAGGAAG TTGGGTAAGC CTGCTTCATG TCCCACTCCA AAGCCTTCTG
  AGTCAGTAGG AAGGACCTCT AGTCAAGAAG TTGTCAAAAA GAAAGAGGTG GCCCCACGGA
  AAGAGCGAGA CCAGGACTGA ACACTCACAC AGAATTCTGT TTCCGGCCTG TCCTTCAGCC
  ACATTCTAGG CTAGACCTCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss60510104	NES16529655	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs51372996					SNP	G	G	G	G	G	G	G	G	G	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60510104	NES16529655	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:93788835 () rs orientation: forward

Symbol	Name	Function Class
Cldn14	claudin 14	within coordinates
Rr324727	regulatory region 324727	1588 bp proximal