rs51373075 SNP Detail

Summary

• ID
  rs51373075
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:31125426 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCAGTGGCTC TCAAGTGGAT
  TCTGCACGAA TGAACCTAGC CTCCTCTTTT GTGAATGGCT TTGTGAATGC CGCCTTTGGT
  CAAGATAAAC TACTGACTGA TGATGGCAAC AAATGGCTTT ACAAAAACAA GGACCATGGG
  ATGTTAAGTG CTGCTGCGTC TCTTGGCATG ATTCTGTTGT GGGATGTGGA TGGTGGCCTC
  R
  CCCAGATTGA CAAGTATCTG TACTCCTCTG AGGACTACAT CAAGTCAGGA GCTCTCCTTG
  CCTGTGGTAT CGTGAATTCT GGAGTCCAGA ATGAGTGTGA TCCTGCCCTG GCACTGCTTT
  CAGACTATGT TCTCCATAAC AGCAATACCA TGAGACTTGG CTCCATCTTT GGGCTAGGTT
  TGGCCTATGC TGGCTCTAAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss61267501	NES16887500	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	G	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs51373075					SNP	A	A	A	A	A	A	G	A	A	A	G	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61267501	NES16887500	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:31125426 () rs orientation: forward

Symbol	Name	Function Class
Gm5422	predicted pseudogene 5422	within coordinates
Gm63653	predicted gene, 63653	within coordinates
Gm67196	predicted gene, 67196	1675 bp downstream