rs51375025 SNP Detail

Summary

• ID
  rs51375025
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:129471394 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGGCT GACAGCTAAT ATTCAACTCT
  S
  CCCTCCTCAG ATTATAACTG ACAGC                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss147442900	ENSMUSSNP5445456	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
ss321313996	CHEV_4_129254845	CHEVERUD	SCREENING_POP	f	SNP			C	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs51375025					SNP	C	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:129471394 () rs orientation: forward

Symbol	Name	Function Class
Fam167b	family with sequence similarity 167, member B	within coordinates
Rr600279	regulatory region 600279	1755 bp distal
Rr600280	regulatory region 600280	1642 bp distal
Rr600281	regulatory region 600281	519 bp distal
Rr600282	regulatory region 600282	282 bp distal
Rr600283	regulatory region 600283	938 bp proximal
Tssr39178	transcription start site region 39178	1950 bp downstream
Tssr43532	transcription start site region 43532	911 bp downstream
Tssr43533	transcription start site region 43533	920 bp downstream
Tssr43534	transcription start site region 43534	934 bp downstream