rs51375739 SNP Detail

Summary

• ID
  rs51375739
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:48821462 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGGCTTGTA ACCTGGAGGT
  GCAGATTTGT TGGGGAATAA CCTAGAAACT GGTGTTAGAT GCTGGTCTTG TTAGGGGGTA
  AACTAAAAAC TGGTTCTAGG TACCAGTCTG TTAGTTAACT TGAGTTCAAC CTTAGGTCAA
  GTTCTCTAAG ATGGAGTCTG AACCCAAAAG GTTTGTTCTG TATGTCTTAG GCTACACAGT
  R
  CATTTGAAGT TGGTCTGGGT TATGTGGGCG TGGTGGCGCA CACCTTTAAT CCCAGCACTC
  AGGAGGCAGA GGCAGGTGGA TTTCTGAGTT CGAGGCCAGT CTGGTCTACA TAGTGAGTTC
  CAGGACAGCC AGGGTGATAC AGAGAAACCC TGTCTCAAAA AAACCAAAAA AAAAAAAAAA
  AAAAAAAGAG ACCCTGTTTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss146280758	ENSMUSSNP3959742	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs51375739					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:48821462 () rs orientation: forward

Symbol	Name	Function Class
Gm52718	predicted gene, 52718	within coordinates
Rr376450	regulatory region 376450	195 bp upstream