rs51380013 SNP Detail

Summary

• ID
  rs51380013
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:120757449 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATTTGTAAA ATATAAGACC
  TTGTCCTTTT TCATAATATA GAGTAGTCTC AATAATAATA ATAATAATAC ATTATTTGAG
  ATAAGAGTCA AAAGAGGGGG GCTGGTGAGA TGGCTCAGTC GGTAAGAGCA CCCGACTGTT
  CTTCCGAAGG TCTGGATTTC AAATCCCAGC AACCATATGG TGGCTCACAA CCATCACTAA
  Y
  GAGATCTGGT TCCCTCTTTT GGAGCATCTG AAGACAGCTA CAGTGTACTT ACATATAATA
  AATGAATAAA TTTTAAAAAA AAGAAAAAAA AAGAAACGAC ATGATGAGGG TGTCTCTTCA
  CACCAACATA ACACTAATTA AGACATGTTA CTTGTACGTA TGTTTTCAGT GCTGACCATT
  TGACACTATA CAACTAATTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	LG/J	SM/J
ss134396228	ENSMUSSNP3488767	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
ss325960962	CHEV_X_118961361	CHEVERUD	SCREENING_POP	f	SNP		T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	LG/J	SM/J
rs51380013					SNP	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:120757449 () rs orientation: forward

Symbol	Name	Function Class
Rr395603	regulatory region 395603	292 bp downstream