rs51385949 SNP Detail

Summary

• ID
  rs51385949
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:154064608 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCAGCTGCCA TATGGAGCTC ATTTCTGTGG CTGGTTCAGT
  TAGTGGAGGG CAGAGGCCTT GCAGAGTAAA TGGGGTGGGG GAAGGGCGAT GAGGGCGTGG
  M
  TAGAGAAGCA GCGCTAAGAG GGACAGGACA AGCCTCTTAG CCATGGCAAT GGCCCTCTCC
  TTGGGGTTGA GGTGAGAGCT TAGGTGTCAC TCCTGGATA                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss145757253	ENSMUSSNP4406895	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs51385949					SNP	C	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:154064608 () rs orientation: forward

Symbol	Name	Function Class
Rr420823	regulatory region 420823	within coordinates
Rr420824	regulatory region 420824	1252 bp proximal