rs51394869 SNP Detail

Summary

• ID
  rs51394869
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:13834902 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTCCTTCTC ATATTCAAGA
  TCATTTTCTG CTTACTTGTT TATTGTCTAT TATTAACAGA GAAGCATTGA AACACCCCAC
  TGTGATGCAT GCTTGTCTGC TGTCCATATA AATCAAAAAG TTTCCCCTTT ACATATTTTG
  CTTATGTTAT TAAGTATACA TGCATTTGCT GTGTACTTTG ATGAACTTAA CCACGAGTAT
  R
  TATATGCATG CATGCATCTG TTTGTCCTTC TATTGATTAT CACTATGGTT ATGCTGTTGC
  TACTTTTTCT GTAGCATTGT TTTATTCCAT AGGATACCTT ATTTAGCTCA GATGTTAAAA
  TTCTCATTTC TAAAAAATTT ATTTTAAGCT TATCAGCATT GCCCTTATGT CCAGTTCTTC
  AGATAGCTGA GGTATAGTTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
ss52292839	NES15361426	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	A	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
rs51394869					SNP	G	G	G	G	G	A	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52292839	NES15361426	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:13834902 () rs orientation: forward

Symbol	Name	Function Class
Gm38668	predicted gene, 38668	259 bp downstream