rs51396182 SNP Detail

Summary

• ID
  rs51396182
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:24791094 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTACA TGGGTAAGTA TGTTACATGT
  R
  ATTGGAAAGA TGCAGACAAC AGAAT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss146998855	ENSMUSSNP413045	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	G
ss323275262	CHEV_10_24635002	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs51396182					SNP	G	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:24791094 () rs orientation: forward

Symbol	Name	Function Class
Arg1	arginase, liver	11 bp downstream
Med23	mediator complex subunit 23	1736 bp downstream
Tssr92746	transcription start site region 92746	424 bp upstream
Tssr92747	transcription start site region 92747	497 bp upstream
Tssr97085	transcription start site region 97085	296 bp downstream
Tssr97086	transcription start site region 97086	342 bp downstream
Tssr97087	transcription start site region 97087	376 bp downstream
Tssr97088	transcription start site region 97088	434 bp downstream
Tssr97089	transcription start site region 97089	453 bp downstream
Tssr97090	transcription start site region 97090	484 bp downstream
Tssr97091	transcription start site region 97091	875 bp downstream
Tssr97092	transcription start site region 97092	895 bp downstream
Tssr97093	transcription start site region 97093	919 bp downstream
Tssr97094	transcription start site region 97094	935 bp downstream
Tssr97095	transcription start site region 97095	949 bp downstream
Tssr97096	transcription start site region 97096	1214 bp downstream
Tssr97097	transcription start site region 97097	1488 bp downstream
Tssr97098	transcription start site region 97098	1636 bp downstream