rs51400125 SNP Detail

Summary

• ID
  rs51400125
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:185416900 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    caggtctcc gtgctggttt ggagagcacc
  ttattcactg agccatctcc ttgggccTCT CACATATTGT TAGATTTCGT GGTTGGTGTG
  GGGAATCAGA CAGCGCTGAT GAAGGCATGA GCAGAGACTG CAAGGGCTAG AGTAAGCAAT
  R
  GAGAACCCAA GTGCATTGAC GACCTGGAAG CAAAGTCGGG AGCGAAGACT TGACTGTTAA
  AGCCCAGTAC TCACAGCCAT GGTCTTCAGA AAACATACCG CCCCCTGCTG GGAGTAGGCG
  GCTCTACAGG CCTGGCCAGC TGAAGATCTG                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320178637	CHEV_1_187508582	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs51400125					SNP	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss146440083	ENSMUSSNP4929087	ENSEMBL	ENSEMBL_Sanger	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:185416900 () rs orientation: forward

Symbol	Name	Function Class
Rr425422	regulatory region 425422	95 bp proximal
Rr425423	regulatory region 425423	283 bp proximal