rs51400765 SNP Detail

Summary

• ID
  rs51400765
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr11:4145509 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACAAG AGCCAGGCAG ATCTCTGTGC
  G
  TTTGAAGCCA GCCTAGGCTT CATAG                                      
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss131631304	ENSMUSSNP4158264	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs51400765					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:4145509 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
D11Dcr2	DNA Segment, Chr 11, Derry C. Roopenian 2			598 bp distal
Rr402391	regulatory region 402391			188 bp upstream
Rr441759	regulatory region 441759			within coordinates
Rr441760	regulatory region 441760			1005 bp proximal
Rr441761	regulatory region 441761			1956 bp proximal
Tbc1d10a	TBC1 domain family, member 10a			Intron
				Noncoding-Transcript-Variant