rs51405456 SNP Detail

Summary

• ID
  rs51405456
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:8858312 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATCTCAGCG ATTCTCTCTA
  AAATGTGATG TTCAATTCAA GACTTTTTTT TTTTTTGCCT ACAATTGGAT TAGAATTTTC
  TCACTGGAAC TATTTGTTAT TCTGAGTTAT TTATATTTTA AGGAAAAGAT TCATTTTTAT
  TCTTTACTGG TGTGTGTGTG TGTGTGTGTT TGTATACATG TGTATGTGGG TGCCCATTGA
  G
  TTCAGAAGAG GGCACTAGAC CCTTGGAGAA GGTACCACAG GCAGCTGTGG GCCATCCAAT
  GTGGGGACCT CTACATGAGC AGTTTGTGCT CTTAACCAAT GAGGAACCTC GCCAGCTTCT
  GCAGACGTGC ACTTATCTGT CTATTTATAT CCCTGTTATG TTCATTTATT CTCATCCCCT
  GTATGAAGCA TGTCCCAGGG                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	LG/J	SM/J
ss146769169	ENSMUSSNP6410485	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
ss323246159	CHEV_10_8702366	CHEVERUD	SCREENING_POP	f	SNP		G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	LG/J	SM/J
rs51405456					SNP	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:8858312 () rs orientation: forward

Symbol	Name	Function Class
Rr223851	regulatory region 223851	289 bp proximal
Rr223852	regulatory region 223852	766 bp proximal