rs51405634 SNP Detail

Summary

• ID
  rs51405634
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:40549265 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAGAAGGCAT CTATCTTCCT
  TTCTGAGCAA CTGGCTCAGT CAGTTGGGAA AGCGGGAGAC AAGGCAGGGG GCGGCTCTAG
  GCCTCCTGCT CCCTCTCAGT GGAAGCTGCT CTCAGCTTCG GAAAATTCCA GAGGGAGGGA
  TGCTCTGCAA GGGGTTTGCA TCTGATAATG AAGATGTGAG GTCTAGTGGC CTCTGGCCGC
  Y
  GATGCTGTTC TGGGGGGGTG GGGGGGATAG AAGGGCAGGT GGAAGGAACA TAGAGGTGAT
  GTGGCTTTAA GTACCAACCG AGAGTGAGCT GCAGAGACAG AGAGAGGGTG GGGTGAGCAC
  CCCAGTGGAG GAAGAGGAGG AGATAAAAGT GTGGGCTTCA TGCTGCACAA CAGTCCGAGA
  CACAGAAATG AAAGGAGAGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss147068192	ENSMUSSNP2963219	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs51405634					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:40549265 () rs orientation: forward

Symbol	Name	Function Class
Ddo	D-aspartate oxidase	within coordinates
Rr430241	regulatory region 430241	856 bp proximal
Tssr93028	transcription start site region 93028	159 bp downstream