rs51407338 SNP Detail

Summary

• ID
  rs51407338
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:171574653 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTCAA ACCTGGACAT AAGCTCAGAC
  K
  TTTTTTTTTT TTTACCCTAC ACTTT                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss120002619	PARCsnp_1.15387	PARC_SEQ	INBRED	f	SNP			G	T
ss120004990	PARCsnp_1.04763	PARC_SEQ	INBRED	f	SNP			G	T
ss146173566	ENSMUSSNP2694187	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs51407338					SNP	T	T	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:171574653 () rs orientation: forward

Symbol	Name	Function Class
Rr423388	regulatory region 423388	1211 bp proximal