rs51416516 SNP Detail

Summary

• ID
  rs51416516
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:68733890 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATTCAAGAAA AGAACTCTTG CTCCAACTCC CAAGTTTGAG
  TTCAGCTTCT TCTGCCTATG ACATTCAGTT CACTTCAAGA TGACTTTTGT GGCCTTCTGT
  Y
  AGTAGCTGCA TTTGACAACT GACCCGAACA GCCCCACACC TGTGTTTAGC CCAACTTCTT
  CTCTGGCCCC TAGAGACTGT TCCTAGACAC CTGGGTCAG                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ
ss62444780	NES17256932	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	C	T	C		T	C	T	T
ss139658639	ENSMUSSNP3721734	ENSEMBL	ENSEMBL_Sanger	f	SNP	T						C
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ
rs51416516					SNP	T	T	T	C	T	C	C	T	C	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss62444780	NES17256932	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:68733890 () rs orientation: forward

Symbol	Name	Function Class
Adam7	a disintegrin and metallopeptidase domain 7	895 bp downstream
Gm31227	predicted gene, 31227	within coordinates
Tssr129424	transcription start site region 129424	1577 bp downstream