rs51418568 SNP Detail

Summary

• ID
  rs51418568
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:30388306 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGGGTGCCC TTCTGACCAT
  AGGGTGGTTG GCAGTGACCA AGTATAAAGT TCTGTGTGCC TTGTAAAATA TCCAGATTTG
  TTTTGCAAAG AGACAGTATT TATTCTCTAC ATGAAGTGCG TTTGCGATAG AAGCCACAAA
  GCCAATGCTG GTAGCTTCCT TGCTTTCTGA CGAGTCCCCA GTTACCAGGA TATGAGATGA
  R
  CATAAGTTCA CCAATAAATA TGATATCCGT AACTAGGGTA TGTAGCGGTT CCCAATTAAA
  TCTACTTAAG TATGTGGCGG CTATGCTCTC TGCCCCACAC CTTCTCAGGC ACAGTGGCTC
  TCTTCCTCCT CCTGGCATGG TGGACCTCCT CCTTCCTCTC CTTCCTCCCT GTCTCATGAA
  CAGGAATCCT CCAAGTCCCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss145440470	ENSMUSSNP4431686	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs51418568					SNP	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:30388306 () rs orientation: forward

Symbol	Name	Function Class
Rr341157	regulatory region 341157	906 bp distal
Tssr143615	transcription start site region 143615	506 bp upstream
Zfand3	zinc finger, AN1-type domain 3	within coordinates