rs51418833 SNP Detail

Summary

• ID
  rs51418833
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:47885521 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A AGACGTTTGG AGGATTGCTT CCCTAAAGAC CATGCTACTA
  TGTAACTTAC GAAGGAACCT ATGTATCATT TGTATGCAAA TGATGGTGTC CTTTTCCTAA
  A
  GTCAGAAAAA AAAATCTAAC TGGAAACTTT TTTGTGGGTG GAGGGGGCGC AATTACAGAG
  TTGTTTGTAA GCTATTCAAG AACCTTTACA TTCCATTACA G                    
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss139408779	ENSMUSSNP2028697	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51418833					SNP	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:47885521 () rs orientation: forward

Symbol	Name	Function Class
Cpgi6388	CpG island 6388	720 bp proximal
Ktn1	kinectin 1	1030 bp upstream
Rr297095	regulatory region 297095	279 bp proximal
Tssr125321	transcription start site region 125321	335 bp upstream
Tssr125322	transcription start site region 125322	383 bp upstream
Tssr125323	transcription start site region 125323	1038 bp upstream
Tssr125324	transcription start site region 125324	1229 bp upstream
Tssr128337	transcription start site region 128337	1150 bp downstream