rs51421625 SNP Detail

Summary

• ID
  rs51421625
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:77041006 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGAACAGCA GGCTTGGAAG
  ATCCCACCAT GTATATCCAA GTGGAAGAAC CCGAAGGGTT ATAAAATTCC ACTGGATAAA
  TGGCTGGCTT CTGATGAAAG GCTTCACATG AGTCATATAA GTGAAAAATT TGACAAACTG
  GCTGAAGTGC TTTCCAGAGC AGCTGTGAGC CCACATCAGT TTACCTCAGT TCCAGAGGGA
  M
  ACTGACGTGT GTGTGTATGA TAATAGCAGA AGAGGTTAGT GCAGCTAAGG AGGTTTGACG
  AGCTGAAGGA GTTGAAGCTG AGTAAGGAAT TCCAGGACTT AGAGGAAGTG ATGGAGAAGA
  GTATCAGAGA AGCCCTGGGC CATCAGGAGA GGCTGAAAGC TGAGCATCGA CACAGAGCCA
  AGATTCTCAA GCTAACGCTT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	MSM/Ms
ss144722363	ENSMUSSNP496968	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	A/J	MSM/Ms
rs51421625					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:77041006 () rs orientation: forward

Symbol	Name	Function Class
Gm70876	predicted gene, 70876	within coordinates
Tfdp1-ps	transcription factor Dp 1, pseudogene	1501 bp upstream
Tssr7562	transcription start site region 7562	1497 bp upstream