rs51423452 SNP Detail

Summary

• ID
  rs51423452
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:85592164 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGGT GGTGGTAGTG GGGTGAGGGT
  M
  AGCCCTCAGC TAGTGTTAGC TTAGG                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss148271364	ENSMUSSNP6504189	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
ss325042875	CHEV_15_85538393	CHEVERUD	SCREENING_POP	f	SNP			A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs51423452					SNP	A	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:85592164 () rs orientation: forward

Symbol	Name	Function Class
Gm34622	predicted gene, 34622	908 bp downstream
Lncppara	long noncoding RNA near Ppara	439 bp downstream
Mirc31	microRNA cluster 31, including Mirlet7c-2 through Mirlet7b	560 bp distal
Mirlet7b	microRNA let7b	560 bp downstream
Mirlet7c-2	microRNA let7c-2	1266 bp downstream
Rr507292	regulatory region 507292	1554 bp distal
Rr507293	regulatory region 507293	583 bp distal
Rr507294	regulatory region 507294	555 bp proximal
Rr507295	regulatory region 507295	1547 bp proximal