rs51424480 SNP Detail

Summary

• ID
  rs51424480
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:75650010 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGGTATGTC TGAAGACATA
  CATTGTACTC ATATACATGA AATAAATAAA ATCATTTTTT AAGAAAAAGT AAAGAAAATA
  AAACATTATA TGGAATTCCA ATGAAAGAAA CAGATCAGTG ATCAACCTCC CAAGTAGCTG
  GGATTATGGA TGTGGTCATC ATGGCCAGCA AGAATTATAT TTTTATGTGT ATGACAAATA
  S
  ATTGATTTGA AGTTAGTTTT GACTGAAATC CTTTCCCCAA TGTCTAGTTC TCTAAAGCAG
  GAATATCTAT GGGAGAGTTT TTTTATGCTT TTGGCAAACA GCAGTTTCTC AGCCCCAGAA
  GCACTGACAG GGAAGAACAG ATGAGACTCA TCACCTCCCA TTCCTTTGAG CATCTTTAAA
  CAGTTAATGT TTCTTAGGAG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss135330150	ENSMUSSNP253226	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs51424480					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:75650010 () rs orientation: forward

Symbol	Name	Function Class
Rr397722	regulatory region 397722	747 bp upstream