rs51425569 SNP Detail

Summary

• ID
  rs51425569
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:65842752 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTAGAAAAA AAAGTTTCAG
  GAAAGTCAGA CACAGCGCAG GTCTCCTGGT GGAAGGTCTC CAAACCATCC TGGTATAACT
  CAACCATGAT TGGACATTAC CAACCCAGGT AATACGGCCA TGGTGCCTGA GGTACATGTC
  TGCTTATCTA GATCACATGG ACCAAGGCTG AGGGTAGACA GGCCAAAACA AGCAGAGCTT
  R
  ACCTGGCAAC ATCCCAAGCA CTGGTCTCAC CACTGTCCCT TCTGATTTCT CAGCTGGACT
  GACAAAGTCT GCACTGGCAT GGCTGAAGTC TATACCCACT CCAACTTTAA CCATTTCTGT
  TTATAGCAGA GCCCTGGCAA CAACACAAAG TGAAGCAAAG GTGAGCTTTC TTCCACGAAG
  TAGAGTTCCT GAATCTTACT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss60417520	NES15922138	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	G	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs51425569					SNP	A	A	A	A	A	A	A	A	A	G	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60417520	NES15922138	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:65842752 () rs orientation: forward

Symbol	Name	Function Class
Gm37037	predicted gene, 37037	1423 bp upstream
Rr76050	regulatory region 76050	1342 bp distal
Rr76051	regulatory region 76051	within coordinates
Rr76052	regulatory region 76052	1000 bp proximal