rs51429771 SNP Detail

Summary

• ID
  rs51429771
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:18996636 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAGCCACCC CCCCATTCAA
  CCACCAGCAC CTCTTAAAAA AAAAAAAAAA AAAAAGGCAG GATTTTGGCA TCATTAGGGA
  ATTTAAAATA AAAGAAGATT TGTTCCCTGC ACTAGAGTTT CCACTTGACC CAGATCACCA
  CATGGGCTGA ATGTTTCCAA AAACAGTAAG AAATACCATG TAGCTGGGCA TAGGGCACAC
  G
  CCTTTAATCC CAGGACTCAG GAGGCAGAGG CAGGCAGATC TCTGAGTTCA AGGCCAGCCT
  GGCCTAAGGT GAGTTTCAGG ACAGCCAAGG CTACCCAGTG AAACCCTGTC TCCAAATAGC
  ACATAGGGCT GGCGAGATGG CTCAACGGGT AAGGGCACTC ACTGACTGCT CTTCTGAAGG
  TCCTGAGTTC AAATCCCAGC                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss148471672	ENSMUSSNP4725275	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs51429771					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:18996636 () rs orientation: forward

Symbol	Name	Function Class
Tssr70880	transcription start site region 70880	1768 bp upstream
Tssr70881	transcription start site region 70881	1704 bp upstream
Tssr70882	transcription start site region 70882	652 bp upstream
Tssr70883	transcription start site region 70883	1758 bp downstream
Vasp	vasodilator-stimulated phosphoprotein	within coordinates