rs51431345 SNP Detail

Summary

• ID
  rs51431345
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:173151051 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGCCT ATTTAATTTT GATATCAGAC
  Y
  TGTGAGCTAA GTAGGGAAAG TGTCA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss146220140	ENSMUSSNP6098104	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	T
ss320131684	CHEV_1_175253615	CHEVERUD	SCREENING_POP	f	SNP				C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs51431345					SNP	C	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:173151051 () rs orientation: forward

Symbol	Name	Function Class
Rr423668	regulatory region 423668	1392 bp distal
Rr423669	regulatory region 423669	422 bp proximal
Rr423670	regulatory region 423670	501 bp proximal
Rr423671	regulatory region 423671	1975 bp proximal