rs51432476 SNP Detail

Summary

• ID
  rs51432476
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:36728301 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTGCTTAGA TTCATCAGTA
  TGTTTGTCTT TGTAATGCTT CTGTTGTTCC ATTCTAAGTC ACACAGGCAC ATTCCTACAG
  CTCCATTCTA GGGGATAACA GTGACTTTTA GCGCCATCTT AACTAGGGGA AGTTCTGTGA
  CTGTCTTTGT TGTAGGCAGA TAAGGTTTTG CTATGCTATT GCTTCAGTGC CATCTTAGAT
  R
  AGGGCAGTCA TGTGGCTGGT TGTAGCTTCA GTGCCATATT TGTTACAGGC AGTCCCCAGT
  TCGCTGCCTT TAGGAGTGCA GCTTGCCAAA GTCACTTAGC AATTAAGATA CAGTTTTCCC
  GTCTATCCTG CTTTGGTAAA TAATGATTTC TAAACATTTA AAAGTTAAAG ACCACTGCCT
  TAAATATATG TTTCTAGCCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss147608237	ENSMUSSNP4259975	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	G
ss324923476	CHEV_15_36657812	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs51432476					SNP	A	G	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:36728301 () rs orientation: forward

Symbol	Name	Function Class
A830021M18Rik	RIKEN cDNA A830021M18 gene	within coordinates
Cpgi7034	CpG island 7034	63 bp distal
Gm41297	predicted gene, 41297	within coordinates
Tssr131079	transcription start site region 131079	1732 bp downstream
Tssr131080	transcription start site region 131080	1678 bp downstream
Tssr131081	transcription start site region 131081	1656 bp downstream
Tssr131082	transcription start site region 131082	1361 bp downstream
Tssr131083	transcription start site region 131083	1185 bp downstream
Tssr131084	transcription start site region 131084	1116 bp downstream