rs51434130 SNP Detail

Summary

• ID
  rs51434130
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  128
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr17:31220118 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCTTTGCAAC CTGACCCTGA CCTTGTTCCC CTCCCCCACC
  TAATTCCTTT AGCGCAGGCT TTTCATTAGT CCCAGGGCCA CCAGATTCCA GATGTGTTTT
  W
  GCTACTACTG AGTGAGCCGG AACACACAAC GCTGAATGAG GTTGGCAGAC TGGGTCCCCA
  GCTGCGCTGC ACAGGAGACT CTGCCATGGC CTTGCCCAGC                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BTBR T<+> Itpr3/J	C3H/HeJ	FVB/NJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
ss60562812	NES16493427	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	T	A
SNP Consensus Information
SNP					Consensus Type	BTBR T<+> Itpr3/J	C3H/HeJ	FVB/NJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
rs51434130					SNP	A	A	A	A	T	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60562812	NES16493427	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:31220118 () rs orientation: forward

Symbol	Name	Function Class
Rr525343	regulatory region 525343	within coordinates
Tssr143635	transcription start site region 143635	792 bp upstream
Umodl1	uromodulin-like 1	Intron