rs51438802 SNP Detail

Summary

• ID
  rs51438802
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:124021089 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTTAAACCA TGATGAACTG
  TAAACTCTTT CACATTTGTG TATTTGAAGA AATAAAAGTC ACACAAAACT CCAATTTCTT
  GGCCAATTCC CATTCCAGAA AAAGTCAAGA TACAAATGGA GCCATGTTTT TAAATAGTCA
  TAAATTCTCT TCCTTTCTTC TACTTTGCGA TCCCCTCCAG AAAAGATCCC TGCAAGACTT
  S
  GCAAGTGTTA TGAAGTGGAG AGTGTTTGCT ATCTATCTCT CTGCTCTGTG GAAAACTTAC
  TGTAACAGAG TTTATCACAA ACAATCCCCA GGAATAGAAG ACACTGTGAG AGTAGGAGAA
  GCCATCACAT ACATTTACTT CCTCATACTT ATTGGAAAAA AAAATATGGA TAGTCTAGTT
  CAAAGTGGGG ATGAATCAAA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss135782634	ENSMUSSNP2434418	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51438802					SNP	G	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:124021089 () rs orientation: forward

Symbol	Name	Function Class
Rr584579	regulatory region 584579	1240 bp distal