rs51440213 SNP Detail

Summary

• ID
  rs51440213
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:9228421 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGTTTTCTC TTGCCTTCTG
  TTGGTTATCC AGAAGAATCC TATTAGACTC AGCTGAGGGA GAGGCTGCTG CACGAAGTGT
  CCAGCCAACT TGCTGAAACT CCCTGTGTGT GGCTGATGGC AACCCTACAT TCCGTTACCA
  CACCATGGCA GTTGTTACTG TTATCCTCTG CACATCTGCA TCCTTTATAC AACCTAGAGT
  S
  GTCTGGGAAG AGTGGGCCTT GACTGGGAAA ATGCCCCCAT TAGATTGGCC TGTGGGCAAG
  CCTGTGAACA TTTTCTTGAT TAATGATTGA TGTGGGAGGG CCCAGCCCAC TGTGCACAGG
  TAGGTGGCCC TGGGTTGTAT AAGGGAGCAG GCAGAAGCAG CCAGGACAGA AAGATACGCC
  ACGGCCTCTG CATCTGCTCC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss145126178	ENSMUSSNP7099957	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51440213					SNP	C	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:9228421 () rs orientation: forward

Symbol	Name	Function Class
1700010I14Rik	RIKEN cDNA 1700010I14 gene	1270 bp downstream
D17Mit225	DNA Segment, Chr 17, Massachusetts Institute of Technology 225	905 bp proximal
Rr521842	regulatory region 521842	276 bp proximal