rs51444434 SNP Detail

Summary

• ID
  rs51444434
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:73359353 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGAAGGCTGT GACTCTGCAG
  ACAGTAACCA GGCATTACCT AAGTCTTGGT TCATGTTGTG AGCAGAGGGC AGGAAAAGGA
  GAAGGAAATG AGGCTCTGCC ACTTCTCAGC GTGCTCAGCC TGAGGCTGGC ACAGACTCCT
  CCCAGCAGCC AGAGCCTAGA TGGGGAAACT GAGGATGCAG GAAGTGGAGG GTGTTGATGG
  W
  ACTCTGGCCT CTACCTCCAT AGGCCACGCC TTCACGATGG TCTCTCCTCT CTACTCTGTG
  CGTGTCTCCT GACTTTTGTC CTCTTTGATG AACCAGGTGT GGGTCAGAAC CATGGCTCAG
  CTATGTGTAT ATGGCACTGT GGTAACTTTT GCCCCTGTAG GAGGCTGCAG GCTGCCTGAG
  GCCAAAAGCC CCTTCAAGGC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss148110668	ENSMUSSNP1152255	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51444434					SNP	T	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:73359353 () rs orientation: forward

Symbol	Name	Function Class
Gm63120	predicted gene, 63120	within coordinates
Rr504083	regulatory region 504083	1006 bp distal
Tssr4621	transcription start site region 4621	318 bp upstream
Tssr4622	transcription start site region 4622	380 bp upstream
Tssr131529	transcription start site region 131529	330 bp upstream
Tssr134702	transcription start site region 134702	226 bp upstream
Tssr134703	transcription start site region 134703	186 bp upstream
Tssr134704	transcription start site region 134704	171 bp upstream
Tssr134705	transcription start site region 134705	162 bp upstream