rs51449185 SNP Detail

Summary

• ID
  rs51449185
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:78806893 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAACATTTAT GCTCTCAGAC
  TGTCAGAGAC TGAGCCACCA ACCAAAGAAC ATTCCTGGGC TTGACCAAGG CTCTTGACAT
  ATATGTAGCA GATGTGTAGC TCAGTCTCCA TGTGGATCCC CCAACAATTG GAGTAGTGGC
  TGTGATTAAA GCTGTTGCCT GTCTGTGAAT TCTGTCTCCA GACTGGGCTG CAATATCTCA
  Y
  CTCAGTGGGA GAAGAAATAC CTGCAGAGAT TTAATGCACC AGAGTGGAGC AATATTCTGG
  AAGCTCACCC TTTCTGAGGA GAAGGGGATG GGGAAATAAA GAGGGGGAGA GCAGTTGGTT
  TATATAATGA ATAAGTCAAT AAATTAATGG AAAAAATTCT GATCTCTGTT ACTGAAACAA
  TCTTCATTGT GCCCTCCCCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss52379840	NES15267277	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C	T	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs51449185					SNP	C	C	C	C	C	C	T	C	C	C	T	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52379840	NES15267277	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:78806893 () rs orientation: forward

Symbol	Name	Function Class
Gm47343	predicted gene, 47343	985 bp downstream
Or7a37	olfactory receptor family 7 subfamily A member 37	447 bp downstream