rs51450283 SNP Detail

Summary

• ID
  rs51450283
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:29191918 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGGTTTCTGC CTCTGTGTGA GCATCTGGCA GGGATAGAAT
  ACTCAGCCAG GTTGGGGTGG GGGGAGGCAC TTCGCTCATC CCATGTGCCG TGAAGGCAGC
  Y
  GAAGCTGGTA AATTCTGGGC TTCCCTTCTG TTTCCAGCTC CTGTCATCTC AGTGAAAGGA
  GTGGGTGGAG GTGGACCAGG GACACAGCAG TGGACATGT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	AKR/J	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	LG/J	MOLF/EiJ	PWD/PhJ	SM/J	WSB/EiJ
ss61587162	NES17538032	PERLEGEN	MM_PANEL2	f	SNP		T	T	C		C		C	C		C
ss137517950	ENSMUSSNP7113447	ENSEMBL	ENSEMBL_Sanger	f	SNP	T				T
ss323976326	CHEV_12_29826784	CHEVERUD	SCREENING_POP	f	SNP							T			T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	AKR/J	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	LG/J	MOLF/EiJ	PWD/PhJ	SM/J	WSB/EiJ
rs51450283					SNP	T	T	T	C	T	C	T	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61587162	NES17538032	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:29191918 () rs orientation: forward

Symbol	Name	Function Class
Gm31333	predicted gene, 31333	10 bp upstream