rs51452762 SNP Detail

Summary

• ID
  rs51452762
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:158524250 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCATATTCC CTTTCATCTA
  ATTCAGTCTT TCTAGTTGGT GTTACATTTC AAACTTCCTT TATGAAACTA CCTAAGATTA
  TTTCTGTTTC CTTGTCTGGA ACTTAACTCT TGCATACATT ATTGAAAGAT AATTACTTAC
  ATAGCATTTG ACATAAGATA TTTGAAAGTG CTTAACTTTT TGAAGACTAT CCTGAAGGTT
  K
  AGTTTTGATG ACAAAAGAGT TTAGTTCTAC TTAAACTGTA AAACTCATTG CAGGAATAAC
  AAAGAAGTTG ATTAGATATG TGATATGAAG CTGATTGGAC ATGTGAACTG CTTCTTAATT
  AGCTGATTTG AAAGCATCCA GATTATGCAT ATCAGTACTG GTCAGGAAAA GTGATATCTA
  TTAATGTCTA AAGAGTATAG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss60333211	NES15837293	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	T	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs51452762					SNP	G	G	G	G	G	T	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60333211	NES15837293	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:158524250 () rs orientation: forward

Symbol	Name	Function Class
Rr421480	regulatory region 421480	963 bp proximal