rs51453241 SNP Detail

Summary

• ID
  rs51453241
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:54871328 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATGGC ATGTGCATAG AACAACATGA
  G
  ATAGCATGTG TGATACACGA GCAGC                                      
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	LG/J	SM/J
ss139567041	ENSMUSSNP6842618	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
ss324638725	CHEV_14_55252708	CHEVERUD	SCREENING_POP	f	SNP		G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	LG/J	SM/J
rs51453241					SNP	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:54871328 () rs orientation: forward

Symbol	Name	Function Class
Cdh24	cadherin-like 24	within coordinates
Cpgi6468	CpG island 6468	1259 bp distal
Rr289238	regulatory region 289238	273 bp proximal
Rr295556	regulatory region 295556	393 bp proximal
Rr299444	regulatory region 299444	328 bp distal
Rr299445	regulatory region 299445	873 bp proximal
Tssr128611	transcription start site region 128611	1582 bp upstream
Tssr128612	transcription start site region 128612	1557 bp upstream